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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
total RNA-seq
12
ATAC-seq
Assay category
24
Transcription
12
DNA accessibility
Date released
559
February, 2021
173
May, 2021
164
July, 2018
114
August, 2021
89
August, 2017
58
July, 2019
49
April, 2018
45
May, 2020
43
March, 2020
26
September, 2018
24
February, 2020
20
November, 2019
16
February, 2023
15
February, 2018
15
October, 2019
4
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
102
bed narrowPeak
76
fastq
59
bam
36
tsv
34
bigWig
10
bed bed3
7
txt
4
bed bed3+
3
bed bedgraph
2
bedpe bed3+
2
hic
Organism
36
Homo sapiens
Biosample type
23
tissue
12
primary cell
1
cell line
Organ
20
pancreas
4
eye
3
epithelium
Project
36
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
36
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
36 results
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total RNA-seq
ATAC-seq
tissue
islet of Langerhans
19
pigmented layer of retina
2
retina
2
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
cell line
EndoC_BH1
1
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