Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
2
pCHi-C
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
2
March, 2020
Available data
2704
bam
2541
bigWig
1421
tsv
1343
bed narrowPeak
893
fastq
678
bigBed narrowPeak
312
tagAlign
256
bed bed3+
255
bed broadPeak
218
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
9
Homo sapiens
Biosample type
9
in vitro differentiated cells
Organ
4
connective tissue
Project
9
AMP
Genome assembly (visualization)
9
hg19
Lab
6
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
organ_slims!
liver
eye
BIOSAMPLE
ASSAY
9 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
pCHi-C
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
lymphocyte of B lineage (iPSC)
1
+ See 1 more…
See all biosamples
Download