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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
4
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
11
DNA accessibility
6
Transcription
Date released
7
June, 2019
6
August, 2021
4
October, 2019
Available data
11
bam
11
bed bed3+
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
11
bigWig
6
tsv
Organism
17
Homo sapiens
Biosample type
11
tissue
6
primary cell
Organ
145
kidney
123
heart
89
epithelium
82
pancreas
36
limb
35
brain
34
musculature of body
18
ureter
17
vasculature
15
blood vessel
13
connective tissue
9
lung
liver
6
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
17
AMP
Genome assembly (visualization)
11
GRCh38
10
hg19
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
17 results
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DNase-seq
single cell RNA-seq
tissue
aorta
4
coronary artery
2
pulmonary artery
2
tibial artery
2
ascending aorta
1
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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