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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
314
ChIP-seq
78
total RNA-seq
50
ATAC-seq
41
DNase-seq
9
single cell RNA-seq
6
Hi-C
4
small RNA-seq
3
pCHi-C
2
FAIRE-seq
2
RRBS
2
WGBS
Assay category
41
DNA accessibility
Date released
35
June, 2019
4
October, 2019
2
November, 2018
Available data
41
bam
41
bed bed3+
41
bed broadPeak
41
bed narrowPeak
41
bigBed broadPeak
41
bigBed narrowPeak
41
bigWig
2
fastq
Organism
41
Homo sapiens
Biosample type
32
tissue
9
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
41
AMP
Genome assembly (visualization)
41
GRCh38
30
hg19
Lab
41
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
41 results
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DNase-seq
tissue
brain
14
coronary artery
2
frontal cortex
2
tibial artery
2
Ammon's horn
1
+ See 11 more…
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 3 more…
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