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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
Assay category
DNA accessibility
5
DNA binding
Target of assay
histone
50
histone modification
28
broad histone mark
22
narrow histone mark
5
RNA binding protein
5
transcription factor
1
chromatin remodeller
Date released
3
November, 2017
2
August, 2017
Available data
1080
bam
934
tsv
920
bigWig
539
fastq
157
txt
119
bed narrowPeak
93
zippedFastqFolder
87
bigBed narrowPeak
46
tagAlign
30
bed bedMethyl
30
bigBed bedMethyl
21
hic
20
bedpe bed3+
19
bed bed3+
7
csv
5
bed broadPeak
5
bigBed broadPeak
3
cool
3
hdf5
2
ibed
1
bedpe
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
5
AMP
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
5
AMP-T2D consortium
organ_slims!
liver
connective tissue
target.investigated_as!
histone
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
5 results
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Clear Filters
ChIP-seq
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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