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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
Assay category
3
3D chromatin structure
Date released
2
July, 2019
1
October, 2019
Available data
1448
bam
1227
bigWig
948
tsv
633
fastq
567
bed narrowPeak
310
bigBed narrowPeak
212
bed bed3+
200
bed broadPeak
198
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
46
tagAlign
30
bed bedMethyl
30
bigBed bedMethyl
21
hic
20
bedpe bed3+
7
csv
5
bed bed3
3
bed bedgraph
3
cool
3
hdf5
2
ibed
1
bedpe
1
tar
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
connective tissue
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
liver
connective tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
3 results
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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cell line
Panc1
1
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