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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
STARR-seq
2
Hi-C
1
ATAC-seq
1
total RNA-seq
Assay category
2
3D chromatin structure
1
DNA accessibility
1
Transcription
Date released
5
August, 2021
2
March, 2019
Available data
1
bedpe
1
bedpe bed3+
1
hic
1
tsv
Organism
7
Homo sapiens
Biosample type
4
tissue
3
cell line
Organ
liver
4
pancreas
2
kidney
Project
7
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
2967
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
organ_slims!
liver
target.investigated_as!
other context
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
7 results
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STARR-seq
Hi-C
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
2
1
1
cell line
HEK293T
2
Synthesized DNA
1
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