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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
Assay category
99
Transcription
3
DNA accessibility
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
79
fastq
46
bigWig
43
bam
43
tsv
19
zippedFastqFolder
Organism
102
Homo sapiens
Biosample type
102
primary cell
6
tissue
Organ
52
epithelium
52
pancreas
2
connective tissue
Project
59
HPAP
43
AMP
Genome assembly (visualization)
46
GRCh38
43
hg19
Lab
59
Klaus Kaestner, Upenn
43
AMP-T2D consortium
organ_slims!
lymph node
BIOSAMPLE
ASSAY
102 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
3
15
2
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
pancreatic beta cell
3
1
1
pancreatic cell
3
enteroendocrine cell
2
pancreatic stellate cell
2
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