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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
150
DNA binding
89
Transcription
14
DNA methylation
5
DNA accessibility
Target of assay
98
histone modification
97
histone
57
broad histone mark
40
narrow histone mark
29
control
23
transcription factor
2
RNA binding protein
Date released
545
February, 2021
258
August, 2017
237
October, 2019
229
August, 2021
193
May, 2020
120
July, 2018
115
May, 2019
95
February, 2023
80
April, 2019
77
July, 2019
76
November, 2017
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
25
February, 2020
19
April, 2020
19
October, 2017
17
November, 2018
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
178
bigWig
175
fastq
170
bam
89
tsv
66
bed narrowPeak
59
tagAlign
26
bed bed3+
bed broadPeak
22
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
257
Homo sapiens
Biosample type
258
tissue
67
in vitro differentiated cells
45
primary cell
Organ
135
pancreas
56
adipose tissue
56
connective tissue
54
liver
13
musculature of body
Project
258
AMP
Genome assembly (visualization)
154
hg19
152
GRCh38
Lab
258
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
lymph node
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
258 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
36
89
1
1
liver
48
3
1
subcutaneous abdominal adipose tissue
35
3
skeletal muscle tissue
9
4
white adipose tissue
12
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