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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
13
ATAC-seq
7
total RNA-seq
2
DNase-seq
1
RNA microarray
Assay category
35
DNA binding
15
DNA accessibility
7
Transcription
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
14
February, 2023
1
December, 2019
1
February, 2020
Available data
42
bam
39
bed narrowPeak
31
bigWig
26
bigBed narrowPeak
8
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
58
Homo sapiens
Biosample type
406
primary cell
79
cell line
58
tissue
24
in vitro differentiated cells
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
313
heart
299
kidney
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
73
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
58
AMP
Genome assembly (visualization)
43
hg19
31
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
lymph node
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
RNA microarray
tissue
tibial nerve
35
1
5
2
pigmented layer of retina
12
2
renal glomerulus
1
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