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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
total RNA-seq
16
ATAC-seq
6
WGBS
4
ChIP-seq
Assay category
32
Transcription
16
DNA accessibility
6
DNA methylation
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
38
tsv
36
bam
35
bigWig
6
fastq
3
bed narrowPeak
3
tagAlign
Organism
58
Homo sapiens
Biosample type
47
cell line
6
primary cell
5
in vitro differentiated cells
Organ
457
connective tissue
386
adipose tissue
151
bone element
93
pancreas
69
heart
66
artery
66
blood vessel
66
vasculature
58
epithelium
8
kidney
8
skeleton
6
limb
3
liver
2
embryo
1
bone marrow
1
thymus
Project
51
AMP
6
HPAP
1
T1D
Genome assembly (visualization)
35
GRCh38
35
hg19
Lab
52
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
48
inconsistent ontology term
organ_slims!
lymph node
BIOSAMPLE
ASSAY
58 results
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Clear Filters
total RNA-seq
ATAC-seq
WGBS
ChIP-seq
cell line
EndoC_BH1
30
16
1
primary cell
pancreatic alpha cell
6
in vitro differentiated cells
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
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