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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
113
histone
113
histone modification
59
narrow histone mark
54
broad histone mark
39
control
17
transcription factor
9
RNA binding protein
7
recombinant protein
3
nucleotide modification
1
chromatin remodeller
Date released
11
October, 2019
11
September, 2018
8
April, 2019
8
August, 2017
7
December, 2017
4
November, 2019
2
August, 2021
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
1
May, 2019
Available data
59
bam
58
bed narrowPeak
58
bigWig
28
fastq
23
bigBed narrowPeak
3
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
59
Homo sapiens
Biosample type
35
primary cell
10
tissue
8
in vitro differentiated cells
6
cell line
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
lymph node
1
pituitary gland
Project
57
AMP
2
T1D
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
59
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
lymph node
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 6 more…
tissue
kidney
10
in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
6
See all biosamples
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