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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
total RNA-seq
6
single cell RNA-seq
Assay category
1659
DNA binding
548
DNA accessibility
50
DNA methylation
38
Transcription
26
3D chromatin structure
Date released
14
October, 2019
9
February, 2023
4
July, 2018
2
March, 2020
2
May, 2020
1
December, 2019
1
February, 2021
1
May, 2021
1
May, 2022
1
May, 2023
1
November, 2018
1
September, 2018
Available data
tsv
1304
bam
1304
bigWig
239
fastq
9
txt
8
csv
Organism
38
Homo sapiens
Biosample type
29
tissue
5
primary cell
4
in vitro differentiated cells
Organ
14
eye
6
pancreas
5
connective tissue
4
bone element
4
skeleton
1
adipose tissue
1
heart
1
kidney
1
liver
1
musculature of body
Project
36
AMP
2
T1D
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
177
Klaus Kaestner, Upenn
60
Katalin Susztak, Upenn
47
KPMP
38
AMP-T2D consortium
20
Karen Mohlke, UNC
19
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
4
Anna Gloyn, Oxford
Audit category:
2
inconsistent ontology term
organ_slims!
mammary gland
files.file_type!
tsv
BIOSAMPLE
ASSAY
38 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
20
acetabular part of hip bone
1
adipose tissue
1
heart
1
ilium
1
+ See 5 more…
primary cell
pancreatic cell
2
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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