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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
353
ChIP-seq
5
total RNA-seq
Assay category
353
DNA binding
5
Transcription
Target of assay
258
transcription factor
66
recombinant protein
64
control
43
RNA binding protein
28
histone
28
histone modification
21
chromatin remodeller
15
narrow histone mark
13
broad histone mark
2
other context
2
other post-translational modification
Date released
707
February, 2021
328
November, 2017
326
August, 2017
309
May, 2021
295
August, 2021
291
May, 2020
265
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
9
October, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
422
bam
360
bigWig
354
fastq
334
bed narrowPeak
333
bigBed narrowPeak
tagAlign
70
bed broadPeak
64
bigBed broadPeak
5
tsv
3
tar
Organism
358
Homo sapiens
Biosample type
326
cell line
23
tissue
9
primary cell
Organ
308
liver
25
brain
18
blood
18
bodily fluid
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
358
AMP
Genome assembly (visualization)
289
hg19
252
GRCh38
Lab
358
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
organ_slims!
mammary gland
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
358 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
303
5
GM12878
18
tissue
layer of hippocampus
8
spleen
7
middle frontal area 46
6
cerebellum (Hemisphere)
2
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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