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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
total RNA-seq
34
single cell RNA-seq
Assay category
125
DNA accessibility
80
Transcription
41
DNA methylation
13
DNA binding
2
3D chromatin structure
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
33
zippedFastqFolder
26
bam
20
bigWig
20
tsv
6
fastq
6
txt
Organism
80
Homo sapiens
Biosample type
46
tissue
33
primary cell
1
cell line
Organ
26
pancreas
20
liver
1
epithelium
1
musculature of body
Project
47
AMP
33
HPAP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
33
Klaus Kaestner, Upenn
21
AMP-T2D consortium
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
80 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
25
liver
20
skeletal muscle tissue
1
primary cell
Langerhans cell
33
cell line
EndoC_BH1
1
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