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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
DNase-seq
6
ChIP-seq
Assay category
15
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
13
June, 2019
4
November, 2017
4
October, 2019
Available data
291
bam
277
bigWig
242
fastq
151
tsv
132
bed narrowPeak
80
zippedFastqFolder
61
bigBed narrowPeak
21
bed broadPeak
21
bigBed broadPeak
16
bed bed3+
6
hic
5
bed bedMethyl
5
bedpe bed3+
5
bigBed bedMethyl
3
cool
3
tagAlign
1
hdf5
1
tar
Organism
21
Homo sapiens
Biosample type
21
primary cell
Organ
78
kidney
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
21
AMP
Genome assembly (visualization)
19
GRCh38
15
hg19
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
mammary gland
liver
BIOSAMPLE
ASSAY
21 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
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