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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
8
RRBS
8
WGBS
4
ATAC-seq
2
Hi-C
1
small RNA-seq
Assay category
16
DNA methylation
15
Transcription
4
DNA accessibility
2
3D chromatin structure
Date released
98
August, 2021
98
February, 2021
88
February, 2023
80
May, 2022
61
September, 2018
57
April, 2019
55
June, 2019
43
October, 2019
40
May, 2024
37
July, 2019
33
April, 2018
33
July, 2018
29
August, 2017
29
May, 2021
26
May, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
March, 2020
7
August, 2020
6
December, 2019
6
November, 2017
6
November, 2020
5
September, 2017
3
August, 2018
3
February, 2020
3
October, 2022
2
October, 2018
1
June, 2018
Available data
27
bigWig
25
bam
15
tsv
14
bed bedMethyl
14
bigBed bedMethyl
4
bed narrowPeak
2
bed bed3+
2
hdf5
Organism
37
Homo sapiens
Biosample type
20
tissue
17
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
37
AMP
Genome assembly (visualization)
29
hg19
25
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
37 results
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total RNA-seq
RRBS
WGBS
ATAC-seq
Hi-C
small RNA-seq
tissue
heart left ventricle
2
1
4
2
heart
2
1
1
right atrium auricular region
2
1
heart right ventricle
2
coronary artery
1
+ See 1 more…
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
brain microvascular endothelial cell
1
cardiac atrium fibroblast
1
+ See 9 more…
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