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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
2
WGBS
1
Hi-C
Assay category
72
DNA binding
2
DNA methylation
1
3D chromatin structure
Target of assay
63
control
9
transcription factor
4
recombinant protein
3
RNA binding protein
Date released
49
November, 2017
13
December, 2017
8
August, 2017
4
November, 2018
1
December, 2018
Available data
96
bam
75
fastq
44
tagAlign
12
tsv
5
bigWig
4
bed narrowPeak
4
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
csv
1
vcf
Organism
75
Homo sapiens
Biosample type
54
cell line
20
tissue
1
in vitro differentiated cells
Organ
108
pancreas
84
epithelium
75
liver
28
connective tissue
23
adipose tissue
10
spleen
8
embryo
6
blood
6
bodily fluid
4
brain
Project
75
AMP
Genome assembly (visualization)
hg19
343
GRCh38
Lab
75
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
mammary gland
assembly!
hg19
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
WGBS
Hi-C
cell line
HepG2
52
1
1
tissue
liver
16
1
right lobe of liver
3
in vitro differentiated cells
hepatocyte
1
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