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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
WGBS
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
12
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
January, 2019
6
November, 2018
3
December, 2018
1
March, 2020
Available data
15
bam
15
bigWig
15
fastq
13
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
741
pancreas
660
liver
624
connective tissue
461
adipose tissue
391
epithelium
326
heart
267
kidney
251
brain
168
vasculature
163
blood vessel
147
bone element
97
limb
89
musculature of body
87
artery
62
blood
62
bodily fluid
32
eye
31
nerve
30
embryo
20
lung
20
vein
18
ureter
16
spleen
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
16
AMP-T2D consortium
organ_slims!
mammary gland
target.investigated_as!
control
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
12
2
1
1
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