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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
ATAC-seq
DNase-seq
1
pCHi-C
Assay category
20
DNA binding
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
6
November, 2018
1
March, 2020
1
October, 2017
Available data
21
bam
21
fastq
13
bed narrowPeak
13
bigWig
12
bigBed narrowPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
885
pancreas
778
liver
668
connective tissue
483
adipose tissue
452
epithelium
353
heart
269
kidney
252
brain
222
vasculature
219
blood vessel
159
bone element
137
artery
85
limb
69
blood
69
bodily fluid
musculature of body
56
eye
41
nerve
37
embryo
22
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
22
AMP-T2D consortium
organ_slims!
musculature of body
assay_title!
DNase-seq
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
ATAC-seq
pCHi-C
tissue
spleen
20
1
1
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