Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
Hi-C
Assay category
28
3D chromatin structure
Date released
8
March, 2020
5
October, 2019
4
July, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Available data
21
hic
18
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
3
cool
1
bedpe
1
fastq
Organism
28
Homo sapiens
Biosample type
10
primary cell
10
tissue
4
cell line
4
in vitro differentiated cells
Organ
9
pancreas
8
epithelium
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
24
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
25
hg19
2
GRCh38
Lab
20
AMP-T2D consortium
3
Bing Ren, UCSD
3
Klaus Kaestner, Upenn
1
ITG
1
Katalin Susztak, Upenn
Audit category:
5
inconsistent ontology term
4
audit script error
Audit category:
1
inconsistent assembly
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
Hi-C
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
+ See 4 more…
tissue
islet of Langerhans
3
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
+ See 3 more…
cell line
HepG2
2
EndoC_BH1
1
Panc1
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
Download