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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1123
total RNA-seq
468
ChIP-seq
368
single cell RNA-seq
250
ATAC-seq
86
RNA microarray
83
snATAC-seq
68
WGBS
54
pCHi-C
28
Hi-C
16
RRBS
13
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
13
Transcription
Date released
13
July, 2019
Available data
13
bam
13
bigWig
13
tsv
Organism
13
Homo sapiens
Biosample type
13
tissue
Organ
4
brain
adipose tissue
3
connective tissue
3
liver
musculature of body
2
pancreas
1
heart
1
kidney
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
13
AMP-T2D consortium
organ_slims!
musculature of body
adipose tissue
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
13 results
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small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
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