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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
16
WGBS
Assay category
32
DNA methylation
Date released
21
July, 2019
7
November, 2018
4
August, 2017
Available data
1771
bam
1625
bed narrowPeak
1573
bigWig
bigBed narrowPeak
859
fastq
343
tagAlign
275
bed broadPeak
251
bigBed broadPeak
212
bed bed3+
101
zippedFastqFolder
85
txt
64
xls
53
tsv
32
bed bedMethyl
32
bigBed bedMethyl
17
hic
14
bedpe bed3+
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
32
Homo sapiens
Biosample type
22
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
musculature of body
files.file_type!
bigBed narrowPeak
biosample_type!
in vitro differentiated cells
assay_slims!
Transcription
BIOSAMPLE
ASSAY
32 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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