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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
DNase-seq
ChIP-seq
Assay category
173
DNA accessibility
Date released
154
June, 2019
9
November, 2018
7
October, 2019
2
August, 2017
1
November, 2020
Available data
1774
bam
1738
bigWig
1591
tsv
499
fastq
459
bed narrowPeak
208
bigBed narrowPeak
186
bed bed3+
175
bed broadPeak
173
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
173
Homo sapiens
Biosample type
144
tissue
27
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
173
AMP
Genome assembly (visualization)
172
GRCh38
150
hg19
Lab
173
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
musculature of body
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
173 results
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Clear Filters
DNase-seq
tissue
heart
18
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
+ See 35 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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