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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
3
DNase-seq
Assay category
13
DNA binding
3
DNA accessibility
Target of assay
10
histone
10
histone modification
6
narrow histone mark
4
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
14
June, 2019
2
May, 2019
Available data
203
bam
184
bigWig
150
tsv
85
txt
55
bed narrowPeak
16
bigBed narrowPeak
11
fastq
7
bedpe bed3+
5
bed bed3+
5
hic
3
bed broadPeak
3
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
16
Homo sapiens
Biosample type
16
primary cell
Organ
10
connective tissue
musculature of body
5
epithelium
5
kidney
4
heart
1
limb
1
vasculature
Project
16
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
Audit category:
28
inconsistent control
16
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
DNase-seq
primary cell
mesenchymal stem cell
6
cardiac fibroblast
3
1
epithelial cell of proximal tubule
2
1
kidney epithelial cell
2
smooth muscle cell of the brain vasculature
1
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