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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
RRBS
7
WGBS
Assay category
21
DNA methylation
Date released
21
July, 2019
Available data
3131
bam
2881
bigWig
1625
bed narrowPeak
1495
tsv
fastq
995
bigBed narrowPeak
299
tagAlign
276
bed broadPeak
252
bigBed broadPeak
237
bed bed3+
154
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
21
Homo sapiens
Biosample type
13
tissue
8
primary cell
Organ
8
heart
6
epithelium
4
kidney
2
brain
musculature of body
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
liver
1
pericardium
Project
21
AMP
Genome assembly (visualization)
14
hg19
7
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
musculature of body
lab.title!
Kyle Gaulton, UCSD
files.file_type!
fastq
BIOSAMPLE
ASSAY
21 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
aorta
1
brain
1
heart
1
+ See 5 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 3 more…
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