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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
DNase-seq
130
ATAC-seq
4
FAIRE-seq
1
snATAC-seq
Assay category
1071
Transcription
838
DNA binding
281
DNA accessibility
33
DNA methylation
7
3D chromatin structure
Date released
131
June, 2019
68
February, 2023
20
November, 2019
20
October, 2019
10
November, 2018
8
February, 2021
8
July, 2019
7
October, 2017
5
August, 2017
2
March, 2020
1
August, 2022
1
January, 2018
Available data
255
bed narrowPeak
194
bam
170
bigWig
152
bigBed narrowPeak
144
bed bed3+
144
bed broadPeak
144
bigBed broadPeak
21
fastq
5
bed bed3
1
tsv
Organism
281
Homo sapiens
Biosample type
281
tissue
182
primary cell
33
in vitro differentiated cells
31
cell line
Organ
69
kidney
66
heart
44
limb
43
blood vessel
43
vasculature
41
artery
38
pancreas
musculature of body
32
brain
31
eye
18
ureter
12
bone element
12
epithelium
12
skeleton
8
adipose tissue
8
connective tissue
5
liver
3
nerve
2
spleen
1
pituitary gland
1
skin of body
Project
281
AMP
Genome assembly (visualization)
225
GRCh38
213
hg19
Lab
281
AMP-T2D consortium
81
Katalin Susztak, Upenn
39
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
10
Xin Sun, UCSD
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
audit script error
1
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
281 results
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DNase-seq
ATAC-seq
FAIRE-seq
snATAC-seq
tissue
coronary artery
2
36
islet of Langerhans
1
34
1
1
heart
18
retina
3
15
brain
14
1
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