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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1483
ChIP-seq
1281
total RNA-seq
330
ATAC-seq
175
single cell RNA-seq
149
DNase-seq
87
RNA microarray
39
pCHi-C
27
WGBS
27
snATAC-seq
18
Hi-C
15
small RNA-seq
10
MeRIP-seq
7
RRBS
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
15
Transcription
Date released
15
July, 2019
Available data
15
bam
15
bigWig
15
tsv
Organism
15
Homo sapiens
Biosample type
15
tissue
primary cell
Organ
4
brain
3
liver
2
adipose tissue
2
connective tissue
2
pancreas
1
heart
1
kidney
musculature of body
Project
15
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
15
AMP-T2D consortium
organ_slims!
musculature of body
month_released!
April, 2019
biosample_type!
primary cell
BIOSAMPLE
ASSAY
15 results
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small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
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