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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
10
February, 2023
1
February, 2021
Available data
2660
bam
2434
bigWig
1406
bed narrowPeak
1323
tsv
947
fastq
831
bigBed narrowPeak
283
tagAlign
228
bed broadPeak
204
bigBed broadPeak
203
bed bed3+
160
txt
64
xls
23
bed bedMethyl
23
bigBed bedMethyl
17
bedpe bed3+
15
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
cell line
primary cell
Organ
5
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
11
AMP
Genome assembly (visualization)
11
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
musculature of body
month_released!
April, 2019
biosample_type!
primary cell
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
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