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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
Assay category
8
DNA accessibility
Date released
6
February, 2023
2
February, 2021
Available data
3269
bam
3043
bigWig
1749
bed narrowPeak
1510
tsv
1356
fastq
995
bigBed narrowPeak
383
tagAlign
276
bed broadPeak
252
bigBed broadPeak
239
bed bed3+
153
zippedFastqFolder
72
txt
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
8
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
cell line
1
primary cell
1
tissue
Organ
6
connective tissue
bone element
4
skeleton
1
brain
1
liver
Project
8
AMP
Genome assembly (visualization)
8
hg19
2
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
musculature of body
bone element
month_released!
February, 2020
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
primary cell
osteoblast
1
tissue
brain
1
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