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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1032
total RNA-seq
173
single cell RNA-seq
15
small RNA-seq
Assay category
1220
Transcription
863
DNA binding
428
DNA accessibility
33
DNA methylation
10
3D chromatin structure
Date released
450
February, 2021
156
August, 2021
143
May, 2020
120
July, 2018
89
August, 2017
47
September, 2023
45
July, 2019
39
May, 2021
26
May, 2022
23
February, 2020
22
October, 2019
19
November, 2019
14
February, 2023
9
April, 2020
7
March, 2020
6
April, 2018
4
May, 2023
1
December, 2019
Available data
1044
tsv
919
bam
913
bigWig
103
fastq
72
txt
6
csv
Organism
1220
Homo sapiens
Biosample type
1220
tissue
434
primary cell
138
in vitro differentiated cells
115
cell line
2
stem cell
Organ
457
connective tissue
399
adipose tissue
291
pancreas
174
liver
115
kidney
109
heart
62
bone element
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
musculature of body
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
1157
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
914
GRCh38
914
hg19
Lab
1071
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
organ_slims!
musculature of body
month_released!
October, 2017
BIOSAMPLE
ASSAY
1220 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
liver
167
1
1
kidney
49
64
bone tissue
58
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