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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
total RNA-seq
19
ATAC-seq
15
ChIP-seq
3
single cell RNA-seq
Assay category
27
Transcription
19
DNA accessibility
15
DNA binding
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
715
February, 2021
406
November, 2017
399
May, 2021
385
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
205
February, 2023
198
May, 2022
175
June, 2019
168
July, 2018
113
May, 2019
98
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
23
tsv
17
fastq
15
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Organism
61
Homo sapiens
Biosample type
61
tissue
Organ
28
brain
14
kidney
6
pancreas
4
adipose tissue
4
connective tissue
3
blood vessel
3
heart
3
limb
3
vasculature
2
artery
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
1
spleen
Project
61
AMP
Genome assembly (visualization)
26
GRCh38
14
hg19
Lab
46
AMP-T2D consortium
14
Katalin Susztak, Upenn
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
61 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
brain
15
kidney
11
3
body of pancreas
1
4
cerebellum (Hemisphere)
1
1
omental fat pad
1
1
+ See 23 more…
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