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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1032
total RNA-seq
878
ChIP-seq
259
ATAC-seq
173
single cell RNA-seq
146
DNase-seq
87
RNA microarray
27
snATAC-seq
26
WGBS
24
pCHi-C
15
small RNA-seq
10
Hi-C
7
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
259
DNA accessibility
Date released
79
February, 2023
64
August, 2021
38
May, 2022
20
November, 2019
16
October, 2019
11
May, 2023
8
February, 2021
8
October, 2017
6
July, 2019
4
March, 2019
2
August, 2017
2
March, 2020
1
January, 2018
Available data
208
bed narrowPeak
64
bam
64
xls
42
bigWig
29
fastq
5
bed bed3
3
bigBed narrowPeak
2
bed broadPeak
1
tsv
Organism
259
Homo sapiens
Biosample type
259
tissue
200
primary cell
42
in vitro differentiated cells
28
cell line
Organ
75
kidney
62
pancreas
39
heart
38
blood vessel
38
vasculature
37
artery
28
eye
21
liver
12
bone element
12
epithelium
12
skeleton
8
limb
6
adipose tissue
6
connective tissue
4
brain
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
248
AMP
11
T1D
Genome assembly (visualization)
158
GRCh38
121
hg19
Lab
130
AMP-T2D consortium
75
Katalin Susztak, Upenn
29
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
organ_slims!
musculature of body
blood
BIOSAMPLE
ASSAY
259 results
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Clear Filters
ATAC-seq
tissue
kidney
75
islet of Langerhans
68
coronary artery
36
liver
20
retina
15
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