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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
315
ChIP-seq
Assay category
315
DNA binding
Target of assay
603
histone modification
602
histone
315
narrow histone mark
287
broad histone mark
183
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
43
August, 2017
31
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
15
May, 2024
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
261
bigWig
259
bed narrowPeak
241
bam
106
bigBed narrowPeak
105
tagAlign
28
fastq
10
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
313
Homo sapiens
Biosample type
315
tissue
111
primary cell
55
in vitro differentiated cells
18
cell line
1
stem cell
Organ
114
brain
44
liver
38
heart
32
pancreas
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
313
AMP
2
T1D
Genome assembly (visualization)
250
GRCh38
232
hg19
Lab
300
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
organ_slims!
musculature of body
blood
BIOSAMPLE
ASSAY
315 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
left cardiac atrium
15
subcutaneous abdominal adipose tissue
11
kidney
10
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