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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
89
total RNA-seq
9
WGBS
5
ATAC-seq
5
DNase-seq
2
RRBS
1
FAIRE-seq
Assay category
89
Transcription
11
DNA accessibility
11
DNA methylation
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
198
May, 2022
168
July, 2018
154
June, 2019
111
August, 2017
98
July, 2019
72
October, 2019
59
September, 2020
56
March, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
23
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
October, 2017
7
August, 2020
7
January, 2018
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
104
fastq
101
bam
101
bigWig
89
tsv
10
bed narrowPeak
10
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
111
Homo sapiens
Biosample type
104
tissue
6
primary cell
1
in vitro differentiated cells
Organ
94
pancreas
8
connective tissue
7
adipose tissue
6
liver
musculature of body
3
epithelium
Project
111
AMP
Genome assembly (visualization)
101
hg19
98
GRCh38
Lab
111
AMP-T2D consortium
organ_slims!
musculature of body
target.investigated_as!
narrow histone mark
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
111 results
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Clear Filters
total RNA-seq
WGBS
ATAC-seq
DNase-seq
RRBS
FAIRE-seq
tissue
islet of Langerhans
89
1
1
liver
3
1
adipose tissue
3
subcutaneous abdominal adipose tissue
3
right lobe of liver
1
1
+ See 1 more…
primary cell
skeletal muscle myoblast
2
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
adipocyte
1
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