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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
5
single cell RNA-seq
4
total RNA-seq
1
MPRA
Assay category
9
Transcription
Date released
89
February, 2021
4
February, 2023
1
October, 2022
Available data
2763
bam
2421
bigWig
1479
tsv
1124
bed narrowPeak
1043
fastq
844
bigBed narrowPeak
250
bed broadPeak
238
bigBed broadPeak
222
bed bed3+
170
tagAlign
94
txt
32
bed bedMethyl
32
bigBed bedMethyl
16
bedpe bed3+
14
hic
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
4
tar
2
ibed
Organism
93
Homo sapiens
Biosample type
93
tissue
1
cell line
Organ
88
bone element
5
kidney
4
skeleton
musculature of body
Project
94
AMP
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
84
inconsistent ontology term
5
audit script error
organ_slims!
musculature of body
target.investigated_as!
narrow histone mark
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
94 results
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RNA microarray
single cell RNA-seq
total RNA-seq
MPRA
tissue
bone element
84
kidney
5
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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