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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
8
ATAC-seq
6
total RNA-seq
4
DNase-seq
Assay category
46
DNA binding
12
DNA accessibility
6
Transcription
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
narrow histone mark
Date released
56
October, 2019
6
February, 2021
2
February, 2020
Available data
62
bam
42
bed narrowPeak
40
bigWig
34
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
64
Homo sapiens
Biosample type
64
tissue
Organ
863
pancreas
731
liver
651
connective tissue
479
adipose tissue
469
epithelium
353
heart
339
kidney
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
64
AMP
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
64
AMP-T2D consortium
organ_slims!
musculature of body
target.investigated_as!
narrow histone mark
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
tissue
tibial nerve
27
1
5
2
tibial artery
19
1
1
2
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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