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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
63
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
715
February, 2021
353
November, 2017
335
May, 2021
314
May, 2020
308
August, 2021
301
August, 2017
205
February, 2023
198
May, 2022
173
October, 2019
168
July, 2018
168
June, 2019
98
July, 2019
81
May, 2019
81
November, 2018
75
December, 2017
65
October, 2018
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
56
March, 2020
49
April, 2018
47
September, 2023
33
December, 2018
31
February, 2018
23
February, 2020
21
January, 2019
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
81
fastq
80
bam
73
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
81
Homo sapiens
Biosample type
54
cell line
26
tissue
1
primary cell
Organ
48
liver
13
blood
13
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
81
AMP
Genome assembly (visualization)
72
GRCh38
64
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
musculature of body
target.investigated_as!
narrow histone mark
chromatin remodeller
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
GM12878
13
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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primary cell
pancreatic cell
1
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