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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
DNase-seq
18
ChIP-seq
Assay category
27
DNA accessibility
18
DNA binding
Target of assay
14
histone
14
histone modification
8
narrow histone mark
6
broad histone mark
4
RNA binding protein
4
transcription factor
1
chromatin remodeller
Date released
24
June, 2019
12
August, 2017
6
November, 2017
2
October, 2019
1
November, 2020
Available data
525
bam
519
bigWig
261
bed narrowPeak
252
tsv
229
fastq
105
bigBed narrowPeak
98
tagAlign
45
bed broadPeak
45
bigBed broadPeak
30
bed bed3+
1
bed bed3
1
hic
Organism
45
Homo sapiens
Biosample type
189
tissue
45
cell line
45
primary cell
1
in vitro differentiated cells
Organ
20
epithelium
11
brain
10
kidney
10
vasculature
6
blood vessel
6
connective tissue
3
heart
2
liver
2
vein
1
eye
1
musculature of body
Project
45
AMP
Genome assembly (visualization)
45
GRCh38
42
hg19
Lab
45
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
nerve
BIOSAMPLE
ASSAY
45 results
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DNase-seq
ChIP-seq
primary cell
skeletal muscle myoblast
12
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
choroid plexus epithelial cell
1
2
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