Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
65
DNA accessibility
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
64
August, 2021
3
November, 2017
1
October, 2019
Available data
3350
bam
3098
bigWig
1750
bed narrowPeak
1595
tsv
1358
fastq
1016
bigBed narrowPeak
398
tagAlign
320
bed broadPeak
283
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
68
Homo sapiens
Biosample type
64
tissue
3
cell line
1
primary cell
Organ
64
kidney
3
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
68
AMP
Genome assembly (visualization)
64
GRCh38
4
hg19
Lab
64
Katalin Susztak, Upenn
4
AMP-T2D consortium
organ_slims!
nerve
BIOSAMPLE
ASSAY
68 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
FAIRE-seq
tissue
kidney
64
cell line
HepG2
3
primary cell
endothelial cell of umbilical vein
1
Download