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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
8
DNase-seq
1
FAIRE-seq
Assay category
207
DNA binding
30
DNA accessibility
26
Transcription
5
3D chromatin structure
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
30
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
12
bam
12
bed narrowPeak
11
bigWig
10
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
tar
Organism
30
Homo sapiens
Biosample type
17
tissue
7
primary cell
4
in vitro differentiated cells
2
cell line
Organ
7
epithelium
6
blood vessel
6
limb
6
vasculature
4
pancreas
3
artery
3
connective tissue
3
kidney
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
30
AMP
Genome assembly (visualization)
15
hg19
11
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
nerve
BIOSAMPLE
ASSAY
30 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
13
tibial artery
1
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
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