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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
240
ChIP-seq
32
DNase-seq
31
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
1
GRO-seq
Assay category
31
Transcription
Date released
12
February, 2020
8
August, 2021
4
February, 2018
4
July, 2019
2
May, 2021
1
October, 2019
Available data
31
tsv
19
bam
19
bigWig
4
fastq
Organism
31
Homo sapiens
Biosample type
17
tissue
8
cell line
6
in vitro differentiated cells
Organ
474
connective tissue
403
pancreas
398
adipose tissue
189
liver
131
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
31
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
31
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
nerve
BIOSAMPLE
ASSAY
31 results
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total RNA-seq
tissue
cerebellum
2
frontal cortex
2
Ammon's horn
1
amygdala
1
anterior cingulate cortex
1
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cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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