Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
135
ChIP-seq
Assay category
135
DNA binding
Target of assay
371
transcription factor
277
histone
277
histone modification
142
broad histone mark
135
narrow histone mark
119
control
89
recombinant protein
75
RNA binding protein
31
chromatin remodeller
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
53
May, 2021
22
August, 2017
15
September, 2018
12
October, 2019
11
June, 2019
10
November, 2017
4
August, 2021
4
November, 2019
1
December, 2017
1
January, 2019
1
March, 2020
1
May, 2019
Available data
132
bigWig
123
bed narrowPeak
121
bam
52
tagAlign
49
fastq
36
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
135
Homo sapiens
Biosample type
tissue
115
primary cell
in vitro differentiated cells
19
cell line
1
stem cell
Organ
41
epithelium
40
pancreas
11
liver
8
vasculature
7
blood vessel
6
vein
5
kidney
4
connective tissue
4
musculature of body
3
brain
2
heart
1
blood
1
bodily fluid
1
eye
Project
93
AMP
42
T1D
Genome assembly (visualization)
132
hg19
119
GRCh38
Lab
83
AMP-T2D consortium
50
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
Audit category:
15
inconsistent ontology term
Audit category:
24
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
organ_slims!
nerve
biosample_type!
tissue
in vitro differentiated cells
BIOSAMPLE
ASSAY
135 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
monocyte
41
pancreatic endocrine cell
12
CD8-positive, alpha-beta T cell
10
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
+ See 17 more…
cell line
HepG2
9
EndoC_BH1
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
Download