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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
15
total RNA-seq
12
ATAC-seq
4
Capture-C
Assay category
25
DNA binding
15
Transcription
12
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
8
control
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
56
August, 2021
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
49
bam
33
bigWig
28
bed narrowPeak
24
tagAlign
15
tsv
5
bed bed3+
Organism
56
Homo sapiens
Biosample type
tissue
42
in vitro differentiated cells
10
cell line
4
primary cell
Organ
8
embryo
6
epithelium
4
connective tissue
4
liver
2
pancreas
Project
56
AMP
Genome assembly (visualization)
44
hg19
41
GRCh38
Lab
52
AMP-T2D consortium
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
organ_slims!
ovary
biosample_type!
tissue
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
in vitro differentiated cells
neural progenitor cell
21
7
10
adipocyte
1
1
osteoblast
1
1
cell line
H1-hESC
8
EndoC_BH1
2
primary cell
hepatocyte
4
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