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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
Assay category
79
DNA binding
Target of assay
42
transcription factor
21
histone
21
histone modification
16
control
11
narrow histone mark
10
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
668
February, 2021
406
November, 2017
378
August, 2017
302
October, 2019
296
May, 2020
168
July, 2018
164
May, 2021
148
August, 2021
120
May, 2019
104
July, 2019
99
February, 2023
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
22
October, 2017
10
December, 2019
9
September, 2017
8
January, 2018
5
November, 2020
4
August, 2018
3
June, 2018
1
August, 2022
1
May, 2022
1
May, 2023
1
October, 2022
Available data
94
bam
94
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
bed bed3+
Organism
79
Homo sapiens
Biosample type
48
tissue
31
in vitro differentiated cells
Organ
63
liver
19
epithelium
10
embryo
Project
79
AMP
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
79
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
ovary
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
79 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
2
definitive endodermal cell
2
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