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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
snATAC-seq
5
single cell RNA-seq
1
Hi-C
Assay category
28
DNA accessibility
5
Transcription
1
3D chromatin structure
Date released
32
February, 2021
December, 2019
1
May, 2022
1
October, 2019
Available data
27
fastq
6
txt
5
csv
5
tsv
1
bed bed3+
1
hic
Organism
34
Homo sapiens
Biosample type
28
primary cell
6
tissue
Organ
5
kidney
4
epithelium
pancreas
1
blood vessel
1
musculature of body
1
vasculature
1
vein
Project
27
HPAP
7
AMP
Genome assembly (visualization)
2
hg19
Lab
27
Klaus Kaestner, Upenn
7
AMP-T2D consortium
Audit category:
270
inconsistent ontology term
34
audit script error
28
inconsistent control
1
inconsistent replicate
organ_slims!
pancreas
assembly!
hg18
month_released!
December, 2019
BIOSAMPLE
ASSAY
34 results
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snATAC-seq
single cell RNA-seq
Hi-C
primary cell
Langerhans cell
27
endothelial cell of umbilical vein
1
tissue
kidney
5
skeletal muscle tissue
1
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