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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
total RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
456
DNA binding
82
Transcription
11
DNA accessibility
2
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
52
February, 2021
17
August, 2021
5
January, 2019
4
October, 2019
2
March, 2020
2
March, 2023
Available data
80
tsv
71
bam
71
bigWig
5
fastq
Organism
80
Homo sapiens
Biosample type
936
tissue
281
primary cell
138
in vitro differentiated cells
82
cell line
2
stem cell
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
34
epithelium
pancreas
14
liver
8
embryo
4
kidney
Project
80
AMP
2
community
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
71
AMP-T2D consortium
9
Bing Ren, UCSD
2
Anna Gloyn, Oxford
Audit category:
3
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
smooth muscle cell of the coronary artery
52
HepG2
14
H1-hESC
8
EndoC-BH1
1
1
early embryonic cell
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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