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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
64
ATAC-seq
49
total RNA-seq
6
snATAC-seq
1
Hi-C
1
RNA microarray
Assay category
155
Transcription
70
DNA accessibility
1
3D chromatin structure
Date released
545
February, 2021
239
October, 2019
227
August, 2021
193
May, 2020
159
June, 2019
137
August, 2017
113
May, 2019
82
November, 2017
80
April, 2019
77
February, 2023
71
July, 2019
48
December, 2017
47
September, 2023
42
May, 2022
31
March, 2020
24
February, 2020
23
October, 2018
19
April, 2020
19
November, 2018
18
October, 2017
15
May, 2023
7
December, 2018
7
January, 2019
3
December, 2019
3
May, 2021
2
January, 2018
1
November, 2019
Available data
98
tsv
64
bed narrowPeak
64
xls
57
txt
1
hic
Organism
226
Homo sapiens
Biosample type
227
tissue
42
cell line
42
in vitro differentiated cells
4
primary cell
Organ
128
kidney
92
heart
6
blood vessel
6
vasculature
2
artery
pancreas
1
adipose tissue
1
connective tissue
Project
227
AMP
Genome assembly (visualization)
64
GRCh38
1
hg19
Lab
128
Katalin Susztak, Upenn
99
AMP-T2D consortium
organ_slims!
pancreas
BIOSAMPLE
ASSAY
227 results
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single cell RNA-seq
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
8
64
49
6
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
aortic valve
4
pulmonary valve
4
tricuspid valve
4
mitral valve
3
cardiac atrium
2
cardiac ventricle
2
interventricular septum
2
pulmonary artery
2
subcutaneous adipose tissue
1
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