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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
RRBS
13
WGBS
Assay category
26
DNA methylation
Date released
17
July, 2019
6
August, 2017
3
November, 2018
Available data
2559
bam
2375
bigWig
1380
bed narrowPeak
1159
tsv
887
fastq
847
bigBed narrowPeak
379
tagAlign
223
bed broadPeak
200
bigBed broadPeak
166
bed bed3+
93
txt
73
zippedFastqFolder
26
bed bedMethyl
26
bigBed bedMethyl
16
bedpe bed3+
15
hic
12
bed bed3
7
bed bedgraph
4
hdf5
4
tar
3
csv
2
ibed
1
tagAlign bed3+
1
vcf
Organism
26
Homo sapiens
Biosample type
18
tissue
7
primary cell
1
cell line
Organ
8
heart
6
epithelium
pancreas
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
26
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
26
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
pancreas
kidney
BIOSAMPLE
ASSAY
26 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
+ See 7 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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