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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
RRBS
8
WGBS
Assay category
21
DNA methylation
Date released
21
July, 2019
Available data
2703
bam
2506
bigWig
1563
bed narrowPeak
1183
tsv
951
bigBed narrowPeak
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
21
Homo sapiens
Biosample type
12
tissue
9
primary cell
Organ
8
heart
6
epithelium
4
kidney
2
brain
2
musculature of body
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
liver
1
pericardium
Project
21
AMP
Genome assembly (visualization)
13
hg19
8
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
pancreas
files.file_type!
fastq
BIOSAMPLE
ASSAY
21 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
aorta
1
brain
1
heart
1
+ See 4 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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